PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004500503.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 262aa    MW: 29405.3 Da    PI: 8.4844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004500503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.8e-1473119354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+++E+rRRdriN+ +++Lr+l+Pk+      K++Ka+ L  +++++k+L
  XP_004500503.1  73 KSHSQAEKRRRDRINTQLANLRKLIPKS-----DKMDKAALLGSVIDHVKDL 119
                     79*************************8.....7****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.21870119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-1372123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-1273119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-1573122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.12E-1073122No hitNo description
SMARTSM003531.5E-1176125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048736.07E-4169204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MENYYDSCEW QHLSTKFPLP PVTVSVPHNN NNNNNNNNIS DSSSASFQYD ELIHSWNLPI  60
EGTAEDRAAT ASKSHSQAEK RRRDRINTQL ANLRKLIPKS DKMDKAALLG SVIDHVKDLK  120
RKAMDISRVI TVPTEIDEVS IDYNHVEDEI CTNKMNKFKD NNNIVIKASV CCDDRPELFT  180
ELIQVLKGLR LTAVKADIAS VGGRIKSILV LCSKDSEENV CINTLKQSLK SAVSKIASSS  240
SISSNCPTRS KRQRFFLPSH FI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004500503.10.0PREDICTED: transcription factor bHLH51
TrEMBLG7JBT81e-147G7JBT8_MEDTR; Transcription factor
STRINGGLYMA18G02940.11e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.19e-47bHLH family protein